STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP68219.1UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (256 aa)    
Predicted Functional Partners:
SFP68243.1
Urea carboxylase.
 
 
 0.993
SFP68265.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
 
 0.993
SFQ11609.1
Sensor histidine kinase inhibitor, KipI family.
 
 0.987
SFQ11631.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
 
 0.977
SFN49064.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
 
 0.976
SFN49030.1
Sensor histidine kinase inhibitor, KipI family.
 
 0.975
SFN48998.1
Mn2+ and Fe2+ transporters of the NRAMP family.
  
 0.815
SFP68186.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.807
SFN49101.1
Uncharacterized protein YcsI, UPF0317 family; Belongs to the D-glutamate cyclase family.
    0.799
SFN85393.1
Delta-1-pyrroline-5-carboxylate dehydrogenase.
   
 
  0.791
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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