Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFN93534.1 | SFP77624.1 | SAMN04489713_103480 | SAMN04489713_117134 | Threonine dehydratase. | Ribosomal-protein-alanine N-acetyltransferase. | 0.505 |
SFN93534.1 | guaA | SAMN04489713_103480 | SAMN04489713_117114 | Threonine dehydratase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.463 |
SFP45955.1 | SFP77624.1 | SAMN04489713_114146 | SAMN04489713_117134 | Transcriptional regulator, contains XRE-family HTH domain. | Ribosomal-protein-alanine N-acetyltransferase. | 0.450 |
SFP77624.1 | SFN93534.1 | SAMN04489713_117134 | SAMN04489713_103480 | Ribosomal-protein-alanine N-acetyltransferase. | Threonine dehydratase. | 0.505 |
SFP77624.1 | SFP45955.1 | SAMN04489713_117134 | SAMN04489713_114146 | Ribosomal-protein-alanine N-acetyltransferase. | Transcriptional regulator, contains XRE-family HTH domain. | 0.450 |
SFP77624.1 | SFP77657.1 | SAMN04489713_117134 | SAMN04489713_117135 | Ribosomal-protein-alanine N-acetyltransferase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.982 |
SFP77624.1 | SFP77689.1 | SAMN04489713_117134 | SAMN04489713_117136 | Ribosomal-protein-alanine N-acetyltransferase. | Hypothetical protein. | 0.661 |
SFP77624.1 | SFP77723.1 | SAMN04489713_117134 | SAMN04489713_117137 | Ribosomal-protein-alanine N-acetyltransferase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.871 |
SFP77624.1 | SFP77758.1 | SAMN04489713_117134 | SAMN04489713_117138 | Ribosomal-protein-alanine N-acetyltransferase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.501 |
SFP77624.1 | SFP77788.1 | SAMN04489713_117134 | SAMN04489713_117139 | Ribosomal-protein-alanine N-acetyltransferase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.774 |
SFP77624.1 | ackA | SAMN04489713_117134 | SAMN04489713_103391 | Ribosomal-protein-alanine N-acetyltransferase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.477 |
SFP77624.1 | guaA | SAMN04489713_117134 | SAMN04489713_117114 | Ribosomal-protein-alanine N-acetyltransferase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.480 |
SFP77624.1 | tsaD | SAMN04489713_117134 | SAMN04489713_117133 | Ribosomal-protein-alanine N-acetyltransferase. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.955 |
SFP77657.1 | SFP77624.1 | SAMN04489713_117135 | SAMN04489713_117134 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | Ribosomal-protein-alanine N-acetyltransferase. | 0.982 |
SFP77657.1 | SFP77689.1 | SAMN04489713_117135 | SAMN04489713_117136 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | Hypothetical protein. | 0.667 |
SFP77657.1 | SFP77723.1 | SAMN04489713_117135 | SAMN04489713_117137 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.999 |
SFP77657.1 | SFP77758.1 | SAMN04489713_117135 | SAMN04489713_117138 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.501 |
SFP77657.1 | SFP77788.1 | SAMN04489713_117135 | SAMN04489713_117139 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.894 |
SFP77657.1 | guaA | SAMN04489713_117135 | SAMN04489713_117114 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.519 |
SFP77657.1 | tsaD | SAMN04489713_117135 | SAMN04489713_117133 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.999 |
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