STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ17994.1Signal transduction histidine kinase. (570 aa)    
Predicted Functional Partners:
SFN05159.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.999
SFP89774.1
HAMP domain-containing protein.
0.999
SFQ39322.1
Hypothetical protein.
 
0.999
SFQ11344.1
PAS domain S-box-containing protein.
 0.998
SFQ18017.1
Serine phosphatase RsbU, regulator of sigma subunit.
 0.998
SFQ31956.1
PAS domain S-box-containing protein.
 0.997
SFP04618.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.996
SFP09910.1
PAS domain S-box-containing protein.
0.996
SFQ41768.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.996
SFN88735.1
Response regulator receiver domain-containing protein.
 0.994
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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