STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ36450.1NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit. (114 aa)    
Predicted Functional Partners:
SFQ36472.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
 
 0.978
SFO09615.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.971
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 
 0.914
SFN92553.1
Sulfate adenylyltransferase.
    
 0.896
SFQ36430.1
NitT/TauT family transport system substrate-binding protein.
 
     0.896
SFN24218.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.853
SFN90714.1
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.844
SFO55862.1
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.844
SFO55112.1
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.844
SFN24240.1
Glutamate synthase (NADPH/NADH) small chain.
  
 0.833
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.