STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ39721.1Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (346 aa)    
Predicted Functional Partners:
SFP32169.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 0.983
SFQ39685.1
Ribose transport system ATP-binding protein.
  0.979
SFN53736.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 0.967
SFQ39702.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 0.966
SFO85875.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 0.956
rbsA
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.936
SFO85846.1
Ribose transport system ATP-binding protein.
  0.933
SFN53766.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
  0.932
SFO64737.1
Ribose transport system ATP-binding protein.
  0.932
SFP34806.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 0.929
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.