STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ49016.1Phage integrase family protein. (98 aa)    
Predicted Functional Partners:
SFQ48998.1
Hypothetical protein; Belongs to the 'phage' integrase family.
      0.917
SFN47750.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.759
SFO35112.1
Phage integrase family protein.
 
     0.749
SFO35137.1
AP2-like DNA-binding integrase domain-containing protein; Belongs to the 'phage' integrase family.
 
     0.714
SFO14762.1
Phage integrase, N-terminal SAM-like domain; Belongs to the 'phage' integrase family.
  
     0.632
SFN30807.1
Membrane proteinase PrsW, cleaves anti-sigma factor RsiW, M82 family.
  
     0.550
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.507
SFQ10285.1
ATP-dependent DNA helicase RecQ.
  
  
 0.504
SFN32664.1
NitT/TauT family transport system substrate-binding protein.
  
     0.498
SFO66830.1
Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.
   
    0.479
Your Current Organism:
Actinomadura madurae
NCBI taxonomy Id: 1993
Other names: A. madurae, ATCC 19425, CCM 136, CCUG 32944, CECT 3043, CIP 105487, DSM 43067, IAM 14277, IFM 0585, IFO 13909, IFO 14623, IMET 9585, JCM 7436, KCTC 9192, NBRC 14623, NCIMB 13469, NCTC 5654, NRRL B-3843, Nocardia madurae, Streptomyces madurae, Streptothrix madurae, VKM Ac-809
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