STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yaaHHypothetical protein yaaH; Escherichia coli K-12 ortholog: b0010; Escherichia coli O157:H7 ortholog: z0010. (188 aa)    
Predicted Functional Partners:
yjcG
Putative symporter yjcG; Transports acetate; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.802
c0014
Hypothetical protein; Residues 1 to 45 of 45 are 71.11 pct identical to residues 1 to 45 of 256 from GenPept.129 : >gb|AAB40782.1| (U82598) enterobactin synthetase component D [Escherichia coli].
       0.636
yaaW
Hypothetical protein yaaW; Escherichia coli K-12 ortholog: b0011; Escherichia coli O157:H7 ortholog: z0011.
  
  
 0.571
yaaI
Hypothetical protein yaaI precursor; Escherichia coli K-12 ortholog: b0013; Escherichia coli O157:H7 ortholog: z0013; Belongs to the UPF0412 family.
  
  
 0.555
yaeP
Hypothetical protein; Residues 1 to 66 of 66 are 98.48 pct identical to residues 1 to 66 of 66 from SwissProt.40 : >sp|P52099|YAEP_ECOLI Hypothetical protein yaeP; Belongs to the UPF0253 family.
  
     0.431
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.