Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
c0184 | fhuA | c0184 | c0185 | Hypothetical protein. | Ferrichrome-iron receptor precursor; Ferric hydroxamate uptake; Escherichia coli K-12 ortholog: b0150; Escherichia coli O157:H7 ortholog: z0161. | 0.572 |
c0184 | fhuB | c0184 | c0188 | Hypothetical protein. | Ferrichrome uptake protein fhuB; Escherichia coli K-12 ortholog: b0153; Escherichia coli O157:H7 ortholog: z0164; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.572 |
c0184 | fhuC | c0184 | c0186 | Hypothetical protein. | Ferrichrome transport ATP-binding protein fhuC; Escherichia coli K-12 ortholog: b0151; Escherichia coli O157:H7 ortholog: z0162. | 0.572 |
c0184 | fhuD | c0184 | c0187 | Hypothetical protein. | Ferrichrome-binding periplasmic protein precursor; Escherichia coli K-12 ortholog: b0152; Escherichia coli O157:H7 ortholog: z0163. | 0.572 |
fhuA | c0184 | c0185 | c0184 | Ferrichrome-iron receptor precursor; Ferric hydroxamate uptake; Escherichia coli K-12 ortholog: b0150; Escherichia coli O157:H7 ortholog: z0161. | Hypothetical protein. | 0.572 |
fhuA | fhuB | c0185 | c0188 | Ferrichrome-iron receptor precursor; Ferric hydroxamate uptake; Escherichia coli K-12 ortholog: b0150; Escherichia coli O157:H7 ortholog: z0161. | Ferrichrome uptake protein fhuB; Escherichia coli K-12 ortholog: b0153; Escherichia coli O157:H7 ortholog: z0164; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.975 |
fhuA | fhuC | c0185 | c0186 | Ferrichrome-iron receptor precursor; Ferric hydroxamate uptake; Escherichia coli K-12 ortholog: b0150; Escherichia coli O157:H7 ortholog: z0161. | Ferrichrome transport ATP-binding protein fhuC; Escherichia coli K-12 ortholog: b0151; Escherichia coli O157:H7 ortholog: z0162. | 0.983 |
fhuA | fhuD | c0185 | c0187 | Ferrichrome-iron receptor precursor; Ferric hydroxamate uptake; Escherichia coli K-12 ortholog: b0150; Escherichia coli O157:H7 ortholog: z0161. | Ferrichrome-binding periplasmic protein precursor; Escherichia coli K-12 ortholog: b0152; Escherichia coli O157:H7 ortholog: z0163. | 0.987 |
fhuB | c0184 | c0188 | c0184 | Ferrichrome uptake protein fhuB; Escherichia coli K-12 ortholog: b0153; Escherichia coli O157:H7 ortholog: z0164; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Hypothetical protein. | 0.572 |
fhuB | fhuA | c0188 | c0185 | Ferrichrome uptake protein fhuB; Escherichia coli K-12 ortholog: b0153; Escherichia coli O157:H7 ortholog: z0164; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Ferrichrome-iron receptor precursor; Ferric hydroxamate uptake; Escherichia coli K-12 ortholog: b0150; Escherichia coli O157:H7 ortholog: z0161. | 0.975 |
fhuB | fhuC | c0188 | c0186 | Ferrichrome uptake protein fhuB; Escherichia coli K-12 ortholog: b0153; Escherichia coli O157:H7 ortholog: z0164; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Ferrichrome transport ATP-binding protein fhuC; Escherichia coli K-12 ortholog: b0151; Escherichia coli O157:H7 ortholog: z0162. | 0.999 |
fhuB | fhuD | c0188 | c0187 | Ferrichrome uptake protein fhuB; Escherichia coli K-12 ortholog: b0153; Escherichia coli O157:H7 ortholog: z0164; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Ferrichrome-binding periplasmic protein precursor; Escherichia coli K-12 ortholog: b0152; Escherichia coli O157:H7 ortholog: z0163. | 0.999 |
fhuC | c0184 | c0186 | c0184 | Ferrichrome transport ATP-binding protein fhuC; Escherichia coli K-12 ortholog: b0151; Escherichia coli O157:H7 ortholog: z0162. | Hypothetical protein. | 0.572 |
fhuC | fhuA | c0186 | c0185 | Ferrichrome transport ATP-binding protein fhuC; Escherichia coli K-12 ortholog: b0151; Escherichia coli O157:H7 ortholog: z0162. | Ferrichrome-iron receptor precursor; Ferric hydroxamate uptake; Escherichia coli K-12 ortholog: b0150; Escherichia coli O157:H7 ortholog: z0161. | 0.983 |
fhuC | fhuB | c0186 | c0188 | Ferrichrome transport ATP-binding protein fhuC; Escherichia coli K-12 ortholog: b0151; Escherichia coli O157:H7 ortholog: z0162. | Ferrichrome uptake protein fhuB; Escherichia coli K-12 ortholog: b0153; Escherichia coli O157:H7 ortholog: z0164; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.999 |
fhuC | fhuD | c0186 | c0187 | Ferrichrome transport ATP-binding protein fhuC; Escherichia coli K-12 ortholog: b0151; Escherichia coli O157:H7 ortholog: z0162. | Ferrichrome-binding periplasmic protein precursor; Escherichia coli K-12 ortholog: b0152; Escherichia coli O157:H7 ortholog: z0163. | 0.999 |
fhuD | c0184 | c0187 | c0184 | Ferrichrome-binding periplasmic protein precursor; Escherichia coli K-12 ortholog: b0152; Escherichia coli O157:H7 ortholog: z0163. | Hypothetical protein. | 0.572 |
fhuD | fhuA | c0187 | c0185 | Ferrichrome-binding periplasmic protein precursor; Escherichia coli K-12 ortholog: b0152; Escherichia coli O157:H7 ortholog: z0163. | Ferrichrome-iron receptor precursor; Ferric hydroxamate uptake; Escherichia coli K-12 ortholog: b0150; Escherichia coli O157:H7 ortholog: z0161. | 0.987 |
fhuD | fhuB | c0187 | c0188 | Ferrichrome-binding periplasmic protein precursor; Escherichia coli K-12 ortholog: b0152; Escherichia coli O157:H7 ortholog: z0163. | Ferrichrome uptake protein fhuB; Escherichia coli K-12 ortholog: b0153; Escherichia coli O157:H7 ortholog: z0164; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.999 |
fhuD | fhuC | c0187 | c0186 | Ferrichrome-binding periplasmic protein precursor; Escherichia coli K-12 ortholog: b0152; Escherichia coli O157:H7 ortholog: z0163. | Ferrichrome transport ATP-binding protein fhuC; Escherichia coli K-12 ortholog: b0151; Escherichia coli O157:H7 ortholog: z0162. | 0.999 |