STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c0272Hypothetical protein yeeT; Escherichia coli K-12 ortholog: b2003; Escherichia coli O157:H7 ortholog: z1218. (73 aa)    
Predicted Functional Partners:
c0270
Hypothetical protein yeeU; Escherichia coli K-12 ortholog: b2004; Escherichia coli O157:H7 ortholog: z1658.
  
  
 0.733
c0271
Hypothetical protein; Residues 178 to 214 of 214 are 72.97 pct identical to residues 1 to 37 of 37 from GenPept.129 : >gb|AAL57577.1|AF453442_6 (AF453442) unknown [Escherichia coli].
       0.727
c0269
Hypothetical protein yeeV; Escherichia coli K-12 ortholog: b2005; Escherichia coli O157:H7 ortholog: z5091.
     
 0.600
c0273
Putative radC-like protein yeeS; Escherichia coli K-12 ortholog: b2002; Escherichia coli O157:H7 ortholog: z1217; Belongs to the UPF0758 family.
  
  
 0.598
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.