Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
c0322 | c0323 | Putative oligogalacturonide transporter; Residues 16 to 496 of 504 are 56.93 pct identical to residues 13 to 495 of 508 from GenPept.129 : >emb|CAC44457.1| (AJ305143) oligogalacturonide transporter [Pectobacterium chrysanthemi]. | Putative exopolygalacturonate lyase; Residues 21 to 729 of 768 are 40.62 pct identical to residues 8 to 686 of 732 from GenPept.129 : >gb|AAL51034.1|AF454849_1 (AF454849) pectate lyase [Klebsiella oxytoca]. | 0.846 |
c0322 | c0325 | Putative oligogalacturonide transporter; Residues 16 to 496 of 504 are 56.93 pct identical to residues 13 to 495 of 508 from GenPept.129 : >emb|CAC44457.1| (AJ305143) oligogalacturonide transporter [Pectobacterium chrysanthemi]. | Hypothetical protein. | 0.537 |
c0323 | c0322 | Putative exopolygalacturonate lyase; Residues 21 to 729 of 768 are 40.62 pct identical to residues 8 to 686 of 732 from GenPept.129 : >gb|AAL51034.1|AF454849_1 (AF454849) pectate lyase [Klebsiella oxytoca]. | Putative oligogalacturonide transporter; Residues 16 to 496 of 504 are 56.93 pct identical to residues 13 to 495 of 508 from GenPept.129 : >emb|CAC44457.1| (AJ305143) oligogalacturonide transporter [Pectobacterium chrysanthemi]. | 0.846 |
c0323 | c0325 | Putative exopolygalacturonate lyase; Residues 21 to 729 of 768 are 40.62 pct identical to residues 8 to 686 of 732 from GenPept.129 : >gb|AAL51034.1|AF454849_1 (AF454849) pectate lyase [Klebsiella oxytoca]. | Hypothetical protein. | 0.539 |
c0325 | c0322 | Hypothetical protein. | Putative oligogalacturonide transporter; Residues 16 to 496 of 504 are 56.93 pct identical to residues 13 to 495 of 508 from GenPept.129 : >emb|CAC44457.1| (AJ305143) oligogalacturonide transporter [Pectobacterium chrysanthemi]. | 0.537 |
c0325 | c0323 | Hypothetical protein. | Putative exopolygalacturonate lyase; Residues 21 to 729 of 768 are 40.62 pct identical to residues 8 to 686 of 732 from GenPept.129 : >gb|AAL51034.1|AF454849_1 (AF454849) pectate lyase [Klebsiella oxytoca]. | 0.539 |