STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybhIHypothetical protein ybhI; Escherichia coli K-12 ortholog: b0770; Escherichia coli O157:H7 ortholog: z0941. (477 aa)    
Predicted Functional Partners:
ybhJ
Hypothetical protein ybhJ; Escherichia coli K-12 ortholog: b0771; Escherichia coli O157:H7 ortholog: z0942.
  
  
 0.633
ybhH
Hypothetical protein ybhH; Escherichia coli K-12 ortholog: b0769; Escherichia coli O157:H7 ortholog: z0940; Belongs to the PrpF family.
  
    0.585
yfdV
Hypothetical protein yfdV; Escherichia coli K-12 ortholog: b2372; Escherichia coli O157:H7 ortholog: z3635.
  
   0.404
ybhD
Hypothetical transcriptional regulator ybhD; Escherichia coli K-12 ortholog: b0768; Escherichia coli O157:H7 ortholog: z0939; Belongs to the LysR transcriptional regulatory family.
       0.403
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.