STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c0965Phage baseplate assembly protein; Residues 1 to 302 of 302 are 65.89 pct identical to residues 1 to 302 of 302 from SwissProt.40 : >sp|P51767|VPJ_BPP2 BASEPLATE ASSEMBLY PROTEIN J (GPJ). (302 aa)    
Predicted Functional Partners:
c0964
Phage baseplate assembly protein; Residues 4 to 110 of 119 are 53.70 pct identical to residues 5 to 112 of 115 from SwissProt.40 : >sp|P51768|VPW_BPP2 BASEPLATE ASSEMBLY PROTEIN W (GPW).
 
 
 0.995
c0966
Putative phage tail protein; Residues 4 to 173 of 201 are 57.05 pct identical to residues 6 to 175 of 176 from SwissProt.40 : >sp|P26701|VPI_BPP2 TAIL PROTEIN I (GPI).
 
 
 0.994
c0963
Putative Phage baseplate assembly protein; Residues 3 to 192 of 192 are 40.19 pct identical to residues 5 to 211 of 211 from SwissProt.40 : >sp|P31340|VPV_BPP2 BASEPLATE ASSEMBLY PROTEIN V (GPV).
 
  
 0.993
c0962
Putative phage tail protein; Residues 1 to 148 of 148 are 98.64 pct identical to residues 1 to 148 of 148 from GenPept.129 : >emb|CAD09447.1| (AL627279) putative phage tail protein [Salmonella enterica subsp. enterica serovar Typhi].
 
    0.983
c0977
Putative tail fiber protein of prophage; Escherichia coli O157:H7 ortholog: z2985.
 
 
 0.983
c0955
Probable phage tail protein; Residues 1 to 67 of 67 are 61.19 pct identical to residues 1 to 67 of 67 from SwissProt.40 : >sp|P51772|VPX_BPP2 TAIL PROTEIN X (GPX).
 
 
 0.975
c0978
Putative regulator of late gene expression; Residues 15 to 364 of 366 are 56.52 pct identical to residues 15 to 381 of 389 from SwissProt.40 : >sp|P21679|VPD_BP186 LATE CONTROL GENE D PROTEIN (GPD).
 
  
 0.973
c0972
Putative tail fiber component of prophage; Escherichia coli O157:H7 ortholog: z2990.
 
 
 0.972
c0971
Probable major tail sheath protein; Escherichia coli O157:H7 ortholog: z2991.
 
   0.970
c0947
Probable capsid portal protein; Residues 2 to 300 of 345 are 96.98 pct identical to residues 1 to 299 of 326 from SwissProt.40 : >sp|P21314|YR75_ECOLI HYPOTHETICAL 36.8 KD PROTEIN (ORF5) (RETRON EC67).
 
    0.968
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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