STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydDTransport ATP-binding protein cydD; Escherichia coli K-12 ortholog: b0887; Escherichia coli O157:H7 ortholog: z1231. (588 aa)    
Predicted Functional Partners:
cydC
Transport ATP-binding protein cydC; Escherichia coli K-12 ortholog: b0886; Escherichia coli O157:H7 ortholog: z1230.
 
 
0.998
cydB
Cytochrome D ubiquinol oxidase subunit II; A terminal oxidase that produces a proton motive force by the vectorial transfer of protons across the inner membrane. It is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at low aeration. Generates a proton motive force using protons and electrons from opposite sides of the membrane to generate H(2)O, transferring 1 proton/electron.
 
  
 0.977
cydA
Cytochrome D ubiquinol oxidase subunit I; A terminal oxidase that produces a proton motive force by the vectorial transfer of protons across the inner membrane. It is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at low aeration. Generates a proton motive force using protons and electrons from opposite sides of the membrane to generate H(2)O, transferring 1 proton/electron. Belongs to the cytochrome ubiquinol oxidase subunit 1 family.
 
  
 0.960
appB
Cytochrome BD-II oxidase subunit II; Escherichia coli K-12 ortholog: b0979; Escherichia coli O157:H7 ortholog: z1396.
 
  
 0.918
appC
Cytochrome BD-II oxidase subunit I; Escherichia coli K-12 ortholog: b0978; Escherichia coli O157:H7 ortholog: z1395.
 
  
 0.899
pstB
Phosphate transport ATP-binding protein pstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.874
yhdZ
Hypothetical amino-acid ABC transporter ATP-binding protein yhdZ; Escherichia coli K-12 ortholog: b3271; Escherichia coli O157:H7 ortholog: z4632.
 
     
0.791
aat
Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.
       0.688
trxB
Thioredoxin reductase; Escherichia coli K-12 ortholog: b0888; Escherichia coli O157:H7 ortholog: z1232.
     
 0.588
glnQ
Glutamine transport ATP-binding protein glnQ; Escherichia coli K-12 ortholog: b0809; Escherichia coli O157:H7 ortholog: z1031.
 
     
0.493
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.