STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
focFF1C minor fimbrial subunit F precursor; Escherichia coli K-12 ortholog: b4318; Escherichia coli O157:H7 ortholog: z5916. (175 aa)    
Predicted Functional Partners:
focC
F1C periplasmic chaperone; Involved in the biogenesis of the F1C fimbriae. Belongs to the periplasmic pilus chaperone family.
 
 
 0.991
focD
F1C fimbrial usher; Escherichia coli K-12 ortholog: b4317; Escherichia coli O157:H7 ortholog: z5915.
 
 
 0.990
fimC
Chaperone protein fimC precursor; Required for the biogenesis of type 1 fimbriae. Binds and interact with FimH (By similarity); Belongs to the periplasmic pilus chaperone family.
 
 
 0.975
fimD
Outer membrane usher protein fimD precursor; Escherichia coli K-12 ortholog: b4317; Escherichia coli O157:H7 ortholog: z5915.
 
 
 0.963
focG
F1C minor fimbrial subunit protein G presursor; Escherichia coli K-12 ortholog: b4319; Escherichia coli O157:H7 ortholog: z5917.
 
 
 0.958
focH
F1C Putative fimbrial adhesin precursor; Residues 38 to 336 of 336 are 81.60 pct identical to residues 1 to 291 of 291 from SwissProt.40 : >sp|P13431|SFAH_ECOLI S-FIMBRIAL ADHESIN PROTEIN SFAH PRECURSOR.
  
 
 0.928
focA
F1C major fimbrial subunit precursor; Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs; Belongs to the fimbrial protein family.
 
  
 0.914
fimA
Type-1 fimbrial protein, A chain precursor; Type-1A pilin; Escherichia coli K-12 ortholog: b4314; Escherichia coli O157:H7 ortholog: z5912.
  
  
 0.858
c1935
Chaperone protein fimC precursor; Escherichia coli K-12 ortholog: b4316; Escherichia coli O157:H7 ortholog: z2201.
 
 
 0.832
c1934
Outer membrane usher protein fimD precursor; Escherichia coli K-12 ortholog: b4317; Escherichia coli O157:H7 ortholog: z2203.
  
   0.821
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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