STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csgECurli production assembly/transport component csgE precursor; May be involved in the biogenesis of curli organelles. (129 aa)    
Predicted Functional Partners:
csgG
Curli production assembly/transport component csgG precursor; May be involved in the biogenesis of curli organelles. Belongs to the CsgG family.
 
 
 0.999
csgF
Curli production assembly/transport component csgF precursor; May be involved in the biogenesis of curli organelles.
 
  
 0.999
csgD
Probable csgAB operon transcriptional Regulatory protein; Escherichia coli K-12 ortholog: b1040; Escherichia coli O157:H7 ortholog: z1673.
 
  
 0.999
csgB
Minor curlin subunit precursor; Escherichia coli K-12 ortholog: b1041; Escherichia coli O157:H7 ortholog: z1675.
 
   
 0.981
csgA
Major curlin subunit precursor; Escherichia coli K-12 ortholog: b1042; Escherichia coli O157:H7 ortholog: z1676.
     
 0.934
csgC
Putative curli production protein csgC precursor; Escherichia coli K-12 ortholog: b1043; Escherichia coli O157:H7 ortholog: z1677.
      
 0.908
yccT
Hypothetical protein yccT precursor; Escherichia coli K-12 ortholog: b0964; Escherichia coli O157:H7 ortholog: z1315; Belongs to the UPF0319 family.
  
     0.763
hybE
Hydrogenase-2 operon protein hybE; Escherichia coli K-12 ortholog: b2992; Escherichia coli O157:H7 ortholog: z4346; Belongs to the HupJ family.
  
     0.736
yehR
Hypothetical lipoprotein yehR precursor; Escherichia coli K-12 ortholog: b2123; Escherichia coli O157:H7 ortholog: z3300.
  
     0.711
yobB
Hypothetical protein yobB; Escherichia coli K-12 ortholog: b1843; Escherichia coli O157:H7 ortholog: z2893.
  
     0.652
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.