Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
c1478 | pepT | c1478 | c1479 | Hypothetical protein. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.572 |
c1478 | potA | c1478 | c1477 | Hypothetical protein. | Spermidine/putrescine transport ATP-binding protein potA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.773 |
c1478 | potB | c1478 | c1476 | Hypothetical protein. | Spermidine/putrescine transport system permease protein potB; Escherichia coli K-12 ortholog: b1125; Escherichia coli O157:H7 ortholog: z1830. | 0.773 |
pepT | c1478 | c1479 | c1478 | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | Hypothetical protein. | 0.572 |
pepT | potA | c1479 | c1477 | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | Spermidine/putrescine transport ATP-binding protein potA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.594 |
pepT | potB | c1479 | c1476 | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | Spermidine/putrescine transport system permease protein potB; Escherichia coli K-12 ortholog: b1125; Escherichia coli O157:H7 ortholog: z1830. | 0.581 |
potA | c1478 | c1477 | c1478 | Spermidine/putrescine transport ATP-binding protein potA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | Hypothetical protein. | 0.773 |
potA | pepT | c1477 | c1479 | Spermidine/putrescine transport ATP-binding protein potA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.594 |
potA | potB | c1477 | c1476 | Spermidine/putrescine transport ATP-binding protein potA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | Spermidine/putrescine transport system permease protein potB; Escherichia coli K-12 ortholog: b1125; Escherichia coli O157:H7 ortholog: z1830. | 0.999 |
potB | c1478 | c1476 | c1478 | Spermidine/putrescine transport system permease protein potB; Escherichia coli K-12 ortholog: b1125; Escherichia coli O157:H7 ortholog: z1830. | Hypothetical protein. | 0.773 |
potB | pepT | c1476 | c1479 | Spermidine/putrescine transport system permease protein potB; Escherichia coli K-12 ortholog: b1125; Escherichia coli O157:H7 ortholog: z1830. | Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. | 0.581 |
potB | potA | c1476 | c1477 | Spermidine/putrescine transport system permease protein potB; Escherichia coli K-12 ortholog: b1125; Escherichia coli O157:H7 ortholog: z1830. | Spermidine/putrescine transport ATP-binding protein potA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.999 |