Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| aroC | c2419 | c2875 | c2419 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Putative anthranilate synthase; Similar to YbtS [Yersinia pestis] and Irp9 [Yersinia enterocolitica]; Residues 1 to 434 of 434 are 99.76 pct identical to residues 1 to 434 of 434 from GenPept.129 : >emb|CAC90732.1| (AJ414150) putative salicylate synthetase [Yersinia pestis]. | 0.910 |
| aroC | menF | c2875 | c2809 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | 0.924 |
| aroC | pabA | c2875 | c4135 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Para-aminobenzoate synthase glutamine amidotransferase component II; Escherichia coli K-12 ortholog: b3360; Escherichia coli O157:H7 ortholog: z4721. | 0.943 |
| aroC | pabB | c2875 | c2217 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Para-aminobenzoate synthase component I; Escherichia coli K-12 ortholog: b1812; Escherichia coli O157:H7 ortholog: z2855. | 0.943 |
| aroC | pheA | c2875 | c3120 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | P-protein; Escherichia coli K-12 ortholog: b2599; Escherichia coli O157:H7 ortholog: z3891; bifunctional; Chorismate mutase; Prephenate dehydratase. | 0.985 |
| aroC | trpA | c2875 | c1725 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.846 |
| aroC | trpB | c2875 | c1726 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.702 |
| aroC | trpD | c2875 | c1729 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase component II; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.986 |
| aroC | trpE | c2875 | c1730 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Anthranilate synthase component I; Escherichia coli K-12 ortholog: b1264; Escherichia coli O157:H7 ortholog: z2546. | 0.966 |
| aroC | tyrA | c2875 | c3121 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | T-protein; Escherichia coli K-12 ortholog: b2600; Escherichia coli O157:H7 ortholog: z3892; bifunctional; Chorismate mutase; Prephenate dehydrogenase. | 0.997 |
| c2419 | aroC | c2419 | c2875 | Putative anthranilate synthase; Similar to YbtS [Yersinia pestis] and Irp9 [Yersinia enterocolitica]; Residues 1 to 434 of 434 are 99.76 pct identical to residues 1 to 434 of 434 from GenPept.129 : >emb|CAC90732.1| (AJ414150) putative salicylate synthetase [Yersinia pestis]. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.910 |
| c2419 | menF | c2419 | c2809 | Putative anthranilate synthase; Similar to YbtS [Yersinia pestis] and Irp9 [Yersinia enterocolitica]; Residues 1 to 434 of 434 are 99.76 pct identical to residues 1 to 434 of 434 from GenPept.129 : >emb|CAC90732.1| (AJ414150) putative salicylate synthetase [Yersinia pestis]. | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | 0.932 |
| c2419 | pabA | c2419 | c4135 | Putative anthranilate synthase; Similar to YbtS [Yersinia pestis] and Irp9 [Yersinia enterocolitica]; Residues 1 to 434 of 434 are 99.76 pct identical to residues 1 to 434 of 434 from GenPept.129 : >emb|CAC90732.1| (AJ414150) putative salicylate synthetase [Yersinia pestis]. | Para-aminobenzoate synthase glutamine amidotransferase component II; Escherichia coli K-12 ortholog: b3360; Escherichia coli O157:H7 ortholog: z4721. | 0.971 |
| c2419 | pheA | c2419 | c3120 | Putative anthranilate synthase; Similar to YbtS [Yersinia pestis] and Irp9 [Yersinia enterocolitica]; Residues 1 to 434 of 434 are 99.76 pct identical to residues 1 to 434 of 434 from GenPept.129 : >emb|CAC90732.1| (AJ414150) putative salicylate synthetase [Yersinia pestis]. | P-protein; Escherichia coli K-12 ortholog: b2599; Escherichia coli O157:H7 ortholog: z3891; bifunctional; Chorismate mutase; Prephenate dehydratase. | 0.889 |
| c2419 | trpA | c2419 | c1725 | Putative anthranilate synthase; Similar to YbtS [Yersinia pestis] and Irp9 [Yersinia enterocolitica]; Residues 1 to 434 of 434 are 99.76 pct identical to residues 1 to 434 of 434 from GenPept.129 : >emb|CAC90732.1| (AJ414150) putative salicylate synthetase [Yersinia pestis]. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.917 |
| c2419 | trpB | c2419 | c1726 | Putative anthranilate synthase; Similar to YbtS [Yersinia pestis] and Irp9 [Yersinia enterocolitica]; Residues 1 to 434 of 434 are 99.76 pct identical to residues 1 to 434 of 434 from GenPept.129 : >emb|CAC90732.1| (AJ414150) putative salicylate synthetase [Yersinia pestis]. | Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.908 |
| c2419 | trpD | c2419 | c1729 | Putative anthranilate synthase; Similar to YbtS [Yersinia pestis] and Irp9 [Yersinia enterocolitica]; Residues 1 to 434 of 434 are 99.76 pct identical to residues 1 to 434 of 434 from GenPept.129 : >emb|CAC90732.1| (AJ414150) putative salicylate synthetase [Yersinia pestis]. | Anthranilate synthase component II; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.999 |
| c2419 | trpE | c2419 | c1730 | Putative anthranilate synthase; Similar to YbtS [Yersinia pestis] and Irp9 [Yersinia enterocolitica]; Residues 1 to 434 of 434 are 99.76 pct identical to residues 1 to 434 of 434 from GenPept.129 : >emb|CAC90732.1| (AJ414150) putative salicylate synthetase [Yersinia pestis]. | Anthranilate synthase component I; Escherichia coli K-12 ortholog: b1264; Escherichia coli O157:H7 ortholog: z2546. | 0.857 |
| c2419 | tyrA | c2419 | c3121 | Putative anthranilate synthase; Similar to YbtS [Yersinia pestis] and Irp9 [Yersinia enterocolitica]; Residues 1 to 434 of 434 are 99.76 pct identical to residues 1 to 434 of 434 from GenPept.129 : >emb|CAC90732.1| (AJ414150) putative salicylate synthetase [Yersinia pestis]. | T-protein; Escherichia coli K-12 ortholog: b2600; Escherichia coli O157:H7 ortholog: z3892; bifunctional; Chorismate mutase; Prephenate dehydrogenase. | 0.889 |
| menF | aroC | c2809 | c2875 | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.924 |
page 1 of 6