STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ynjFHypothetical protein ynjF; Escherichia coli K-12 ortholog: b1758; Escherichia coli O157:H7 ortholog: z2790; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (208 aa)    
Predicted Functional Partners:
c2155
Protein ynjB; Escherichia coli K-12 ortholog: b1754; Escherichia coli O157:H7 ortholog: z2786.
 
     0.802
ynjC
Hypothetical ABC transporter permease protein ynjC; Escherichia coli K-12 ortholog: b1755; Escherichia coli O157:H7 ortholog: z2787.
 
     0.802
ynjD
Hypothetical ABC transporter ATP-binding protein ynjD; Escherichia coli K-12 ortholog: b1756; Escherichia coli O157:H7 ortholog: z2788.
 
     0.784
ynbA
Hypothetical protein ynbA; Escherichia coli K-12 ortholog: b1408; Escherichia coli O157:H7 ortholog: z2319.
      
 0.764
yfgA
Hypothetical protein yfgA; Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis.
  
    0.651
c2160
CTP pyrophosphohydrolase; Escherichia coli K-12 ortholog: b1759; Escherichia coli O157:H7 ortholog: z2791; Belongs to the Nudix hydrolase family.
       0.608
ynbD
Hypothetical protein ynbD; Escherichia coli K-12 ortholog: b1411; Escherichia coli O157:H7 ortholog: z2316.
  
 
 0.554
ydjX
Hypothetical protein ydjX; Escherichia coli K-12 ortholog: b1750; Escherichia coli O157:H7 ortholog: z2782.
 
     0.504
ydhS
Hypothetical protein ydhS; Escherichia coli K-12 ortholog: b1668; Escherichia coli O157:H7 ortholog: z2695.
  
     0.492
ynbB
Hypothetical protein ynbB; Escherichia coli K-12 ortholog: b1409; Escherichia coli O157:H7 ortholog: z2318.
  
    0.486
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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