STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c2434Putative salicyl-AMP ligase; Similar to ligase YbtE [Yersinia pestis]; Residues 1 to 94 of 94 are 98.93 pct identical to residues 432 to 525 of 525 from GenPept.129 : >emb|CAC90723.1| (AJ414150) yersiniabactin siderophore biosynthetic protein [Yersinia pestis]. (94 aa)    
Predicted Functional Partners:
c2433
Enterobactin synthetase component E; Enterochelin synthase E; Escherichia coli K-12 ortholog: b0594; Escherichia coli O157:H7 ortholog: z0736; bifunctional; 2,3-dihydroxybenzoate-AMP ligase; S-dihydroxybenzoyltransferase.
     0.939
entF
Enterobactin synthetase component F; Escherichia coli K-12 ortholog: b0586; Escherichia coli O157:H7 ortholog: z0727.
 
 
 0.858
entB
Isochorismatase; Escherichia coli K-12 ortholog: b0595; Escherichia coli O157:H7 ortholog: z0737.
 
    0.779
c2432
Putative thioesterase; Similar to YbtT [Yersinia pestis]; Residues 1 to 187 of 218 are 40.95 pct identical to residues 48 to 235 of 252 from SwissProt.40 : >sp|P19829|SAST_VIBAN Probable anguibactin biosynthesis thioesterase.
 
  
 0.735
c0672
Conserved hypothetical protein; Escherichia coli O157:H7 ortholog: z0726.
 
  
 0.655
entC
Isochorismate synthase entC; Escherichia coli K-12 ortholog: b0593; Escherichia coli O157:H7 ortholog: z0735.
 
   
 0.654
entA
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Escherichia coli K-12 ortholog: b0596; Escherichia coli O157:H7 ortholog: z0738.
  
   0.641
c2429
Hypothetical protein; Residues 887 to 1176 of 1569 are 29.73 pct identical to residues 970 to 1270 of 3163 from GenPept.129 : >emb|CAC90726.1| (AJ414150) yersiniabactin biosynthetic protein [Yersinia pestis].
 
     0.634
c2426
Similar to C-terminus of Ybt peptide synthetase HMWP2 [Yersinia pestis]; Residues 95 to 597 of 709 are 35.05 pct identical to residues 34 to 551 of 2035 from GenPept.129 : >emb|CAC90727.1| (AJ414150) yersiniabactin biosynthetic protein [Yersinia pestis].
 
     0.590
c2461
Hypothetical protein; Residues 46 to 514 of 1603 are 34.82 pct identical to residues 2731 to 3210 of 3317 from GenPept.129 : >gb|AAF17280.1| (AF204805) NosC [Nostoc sp. GSV224].
  
     0.565
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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