STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c2559Hypothetical protein; Residues 2 to 365 of 371 are 50.00 pct identical to residues 28 to 394 of 399 from GenPept.129 : >gb|AAB49389.1| (M84642) orf7.17; function unknown [Salmonella enterica]. (371 aa)    
Predicted Functional Partners:
c2558
Mannose-1-phosphate guanylyltransferase; GDP; Escherichia coli K-12 ortholog: b2049; Escherichia coli O157:H7 ortholog: z3213; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.872
wcaJ
Putative colanic biosynthesis UDP-glucose lipid carrier transferase; Escherichia coli K-12 ortholog: b2047; Escherichia coli O157:H7 ortholog: z3211.
  
  
 0.667
c2563
Glycosyl transferase; Residues 9 to 179 of 289 are 31.21 pct identical to residues 8 to 173 of 327 from GenPept.129 : >gb|AAC69672.1| (AF019746) putative beta1,3-glucosyltransferase WaaV [Escherichia coli].
 
 
 0.633
c2562
Glycosyl transferase; Residues 169 to 353 of 360 are 27.89 pct identical to residues 153 to 336 of 336 from GenPept.129 : >gb|AAL80431.1| (AE010155) glycosyltransferase [Pyrococcus furiosus DSM 3638].
 
     0.626
c2566
Hypothetical protein; Residues 11 to 409 of 418 are 24.94 pct identical to residues 7 to 412 of 431 from GenPept.129 : >gb|AAK81005.1|AE007803_8 (AE007803) Possible O-antigen/teichoic acid transporter [Clostridium acetobutylicum].
  
  
 0.621
c2560
UDP-glucose 4-epimerase; Escherichia coli K-12 ortholog: b0759; Escherichia coli O157:H7 ortholog: z0929; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
   
 0.616
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.609
manB
Phosphomannomutase; Escherichia coli K-12 ortholog: b2048; Escherichia coli O157:H7 ortholog: z3194.
  
  
 0.586
ugd
UDP-glucose 6-dehydrogenase; Escherichia coli K-12 ortholog: b2028; Escherichia coli O157:H7 ortholog: z3190; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.538
c2588
Hypothetical protein; Residues 1 to 167 of 167 are 98.80 pct identical to residues 213 to 379 of 379 from GenPept.129 : >gb|AAG57122.1|AE005432_3 (AE005432) putative polysaccharide export protein [Escherichia coli O157:H7 EDL933].
  
  
 0.520
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.