STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcaBPutative colanic acid biosynthesis acetyltransferase wcaB; Escherichia coli K-12 ortholog: b2058; Escherichia coli O157:H7 ortholog: z3222; Belongs to the transferase hexapeptide repeat family. (162 aa)    
Predicted Functional Partners:
wcaC
Putative colanic acid biosynthesis glycosyl transferase wcaC; Escherichia coli K-12 ortholog: b2057; Escherichia coli O157:H7 ortholog: z3221.
 
  
 0.979
wcaF
Putative colanic acid biosynthesis acetyltransferase wcaF; Escherichia coli K-12 ortholog: b2054; Escherichia coli O157:H7 ortholog: z3218.
 
  
 0.970
wcaE
Putative colanic acid biosynthesis glycosyl transferase wcaE; Escherichia coli K-12 ortholog: b2055; Escherichia coli O157:H7 ortholog: z3219.
 
  
 0.964
wcaA
Putative colanic acid biosynthesis glycosyl transferase wcaA; Escherichia coli K-12 ortholog: b2059; Escherichia coli O157:H7 ortholog: z3223.
 
  
 0.951
wcaI
Putative colanic acid biosynthesis glycosyl transferase wcaI; Escherichia coli K-12 ortholog: b2050; Escherichia coli O157:H7 ortholog: z3214.
 
  
 0.910
wcaD
Putative colanic acid polymerase; Escherichia coli K-12 ortholog: b2056; Escherichia coli O157:H7 ortholog: z3220.
  
  
 0.910
cysK
Cysteine synthase A; Escherichia coli K-12 ortholog: b2414; Escherichia coli O157:H7 ortholog: z3680; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.870
c2586
Tyrosine-protein kinase wzc; Escherichia coli K-12 ortholog: b2060; Escherichia coli O157:H7 ortholog: z3224.
  
  
 0.827
cysM
Cysteine synthase B; Escherichia coli K-12 ortholog: b2421; Escherichia coli O157:H7 ortholog: z3686; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.822
wcaH
GDP-mannose mannosyl hydrolase; Hydrolyzes GDP-mannose; Belongs to the Nudix hydrolase family.
  
    0.815
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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