STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yegVHypothetical sugar kinase yegV; Escherichia coli K-12 ortholog: b2100; Escherichia coli O157:H7 ortholog: z3263; Belongs to the carbohydrate kinase PfkB family. (321 aa)    
Predicted Functional Partners:
yegU
Hypothetical protein yegU; Escherichia coli K-12 ortholog: b2099; Escherichia coli O157:H7 ortholog: z3262.
   
 0.965
yegT
Putative nucleoside transporter yegT; Escherichia coli K-12 ortholog: b2098; Escherichia coli O157:H7 ortholog: z3261.
 
     0.833
yfcH
Hypothetical protein yfcH; Escherichia coli K-12 ortholog: b2304; Escherichia coli O157:H7 ortholog: z3566.
      
 0.818
yaaW
Hypothetical protein yaaW; Escherichia coli K-12 ortholog: b0011; Escherichia coli O157:H7 ortholog: z0011.
  
   
 0.719
ydhS
Hypothetical protein ydhS; Escherichia coli K-12 ortholog: b1668; Escherichia coli O157:H7 ortholog: z2695.
      
 0.681
c2624
Hypothetical protein.
       0.610
rbsD
High affinity ribose transport protein rbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.590
yobB
Hypothetical protein yobB; Escherichia coli K-12 ortholog: b1843; Escherichia coli O157:H7 ortholog: z2893.
  
   0.525
yaeF
Hypothetical lipoprotein yaeF precursor; Escherichia coli K-12 ortholog: b0193; Escherichia coli O157:H7 ortholog: z0205.
  
     0.520
fbaB
Fructose-bisphosphate aldolase class I; Escherichia coli K-12 ortholog: b2097; Escherichia coli O157:H7 ortholog: z3260.
  
  
 0.506
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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