STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c3545Hypothetical protein. (46 aa)    
Predicted Functional Partners:
yggN
Hypothetical protein yggN; Escherichia coli K-12 ortholog: b2958; Escherichia coli O157:H7 ortholog: z4303.
       0.718
yggL
Hypothetical protein yggL; Escherichia coli K-12 ortholog: b2959; Escherichia coli O157:H7 ortholog: z4304.
       0.709
yggH
Hypothetical methyltransferase yggH; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
       0.709
mutY
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.493
ansB
L-asparaginase II precursor; Escherichia coli K-12 ortholog: b2957; Escherichia coli O157:H7 ortholog: z4302; Belongs to the asparaginase 1 family.
       0.431
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.