STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c3892Putative N-acetylgalctosamine-6-phosphate deacetylase; Escherichia coli O157:H7 ortholog: z4489. (384 aa)    
Predicted Functional Partners:
agaI
Putative galactosamine-6-phosphate isomerase; Escherichia coli K-12 ortholog: b3141; Escherichia coli O157:H7 ortholog: z4497.
 
 0.989
c3891
Putative phosphotransferase system enzyme subunit; Escherichia coli O157:H7 ortholog: z4488.
 
 
 0.982
c3889
Putative phosphotransferase system enzyme subunit; Escherichia coli O157:H7 ortholog: z4486.
 
 
 0.978
c3890
PTS system, N-acetylgalactosamine-specific IID component; EIID-AGA; Escherichia coli K-12 ortholog: b3140; Escherichia coli O157:H7 ortholog: z4487.
 
 
 0.976
agaV
PTS system, N-acetylgalactosamine-specific IIB component 2; EIIB-AGA'; Escherichia coli K-12 ortholog: b3133; Escherichia coli O157:H7 ortholog: z4485.
  
 
 0.971
agaC
PTS system, N-acetylgalactosamine-specific IIC component 1; EIIC-AGA; Escherichia coli K-12 ortholog: b3139; Escherichia coli O157:H7 ortholog: z4493.
  
 
 0.934
agaD
PTS system, N-acetylgalactosamine-specific IID component; EIID-AGA; Escherichia coli K-12 ortholog: b3140; Escherichia coli O157:H7 ortholog: z4494.
  
 
 0.927
agaB
PTS system, N-acetylgalactosamine-specific IIB component 1; EIIB-AGA; Escherichia coli K-12 ortholog: b3138; Escherichia coli O157:H7 ortholog: z4492.
  
 
 0.926
nagB
Glucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
 
 0.913
yieK
Hypothetical protein yieK; Escherichia coli K-12 ortholog: b3718.
 
 
 0.860
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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