STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c3988Hypothetical protein. (137 aa)    
Predicted Functional Partners:
yhcB
Hypothetical protein yhcB; Escherichia coli K-12 ortholog: b3233; Escherichia coli O157:H7 ortholog: z4592; To H.influenzae HI_1628.
       0.773
degQ
Protease degQ precursor; Escherichia coli K-12 ortholog: b3234; Escherichia coli O157:H7 ortholog: z4593; Belongs to the peptidase S1C family.
       0.613
yhcM
Hypothetical protein yhcM; Reduces the stability of FtsZ polymers in the presence of ATP.
       0.502
degS
Protease degS precursor; Escherichia coli K-12 ortholog: b3235; Escherichia coli O157:H7 ortholog: z4594.
       0.437
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.