STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhfVPhosphotriesterase homology protein; Escherichia coli K-12 ortholog: b3379. (292 aa)    
Predicted Functional Partners:
yhfX
Hypothetical protein yhfX; Escherichia coli K-12 ortholog: b3381.
 
  
 0.952
yhfU
Hypothetical protein yhfU; Escherichia coli K-12 ortholog: b3378.
 
     0.949
yhfT
Hypothetical protein yhfT; Escherichia coli K-12 ortholog: b3377.
 
    0.948
yhfS
Hypothetical protein yhfS; Escherichia coli K-12 ortholog: b3376.
 
     0.941
yhfW
Hypothetical protein yhfW; Escherichia coli K-12 ortholog: b3380.
 
     0.932
yhfZ
Hypothetical protein yhfZ; Escherichia coli K-12 ortholog: b3383.
 
     0.896
yhfY
Hypothetical protein yhfY; Escherichia coli K-12 ortholog: b3382.
       0.579
cutC
Putative conserved protein; Participates in the control of copper homeostasis.
  
    0.442
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.