STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhjVHypothetical transport protein yhjV; Escherichia coli K-12 ortholog: b3539; Escherichia coli O157:H7 ortholog: z4956. (444 aa)    
Predicted Functional Partners:
fepE
Ferric enterobactin transport protein fepE; Escherichia coli K-12 ortholog: b0587; Escherichia coli O157:H7 ortholog: z0728.
  
     0.666
yrbL
Hypothetical protein yrbL; Escherichia coli K-12 ortholog: b3207; Escherichia coli O157:H7 ortholog: z4570.
  
 
 0.617
dppF
Dipeptide transport ATP-binding protein dppF; Escherichia coli K-12 ortholog: b3540; Escherichia coli O157:H7 ortholog: z4957; Belongs to the ABC transporter superfamily.
      
 0.611
yobB
Hypothetical protein yobB; Escherichia coli K-12 ortholog: b1843; Escherichia coli O157:H7 ortholog: z2893.
  
     0.606
c4353
Hypothetical protein.
       0.549
napD
NapD protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
     0.512
yhaM
Conserved hypothetical protein; Escherichia coli O157:H7 ortholog: z4462; Belongs to the UPF0597 family.
 
  
 0.493
ygiW
Protein ygiW precursor; Escherichia coli K-12 ortholog: b3024; Escherichia coli O157:H7 ortholog: z4376.
  
     0.486
ydhU
PhsC protein homolog; Escherichia coli K-12 ortholog: b1670; Escherichia coli O157:H7 ortholog: z2697.
  
     0.466
yccT
Hypothetical protein yccT precursor; Escherichia coli K-12 ortholog: b0964; Escherichia coli O157:H7 ortholog: z1315; Belongs to the UPF0319 family.
  
     0.448
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.