STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c4502Putative antiporter; Residues 5 to 481 of 489 are 50.10 pct identical to residues 2 to 479 of 485 from GenPept.129 : >gb|AAD19168.1| (AE001683) Arginine/Ornithine Antiporter [Chlamydophila pneumoniae CWL029]. (489 aa)    
Predicted Functional Partners:
arcA-2
Putative arginine deiminase; Residues 7 to 407 of 407 are 47.79 pct identical to residues 10 to 416 of 418 from SwissProt.40 : >sp|P13981|ARCA_PSEAE Arginine deiminase (ADI) (Arginine dihydrolase) (AD).
 
  
 0.725
arcC
Carbamate kinase; Escherichia coli K-12 ortholog: b0521; Escherichia coli O157:H7 ortholog: z0676; Belongs to the carbamate kinase family.
 
  
 0.563
c4501
Putative conserved protein; Residues 7 to 750 of 789 are 38.82 pct identical to residues 4 to 744 of 756 from MG1655 : b4117.
  
  
 0.539
yqeA
Carbamate kinase-like protein yqeA; Escherichia coli K-12 ortholog: b2874; Escherichia coli O157:H7 ortholog: z4213; Belongs to the carbamate kinase family.
 
  
 0.475
c4503
Insertion element IS1 1/2/3/5/6 protein insA; IS1a/IS1b/IS1c/IS1d; Escherichia coli K-12 ortholog: b3444.
       0.451
c4500
Putative amino acid antiporter; Residues 20 to 492 of 499 are 47.78 pct identical to residues 12 to 476 of 483 from GenPept.129 : >gb|AAF73583.1| (AE002332) amino acid permease [Chlamydia muridarum].
 
    
0.414
insB
Insertion element IS1 1/5/6 protein insB; Escherichia coli K-12 ortholog: b3445; Escherichia coli O157:H7 ortholog: z1562.
       0.408
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.