STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c4558Hypothetical protein; Residues 1 to 243 of 243 are 85.59 pct identical to residues 1 to 243 of 246 from GenPept.129 : >gb|AAL67401.1|AF447814_69 (AF447814) intergenic-region protein [Escherichia coli]. (243 aa)    
Predicted Functional Partners:
c2527
Hypothetical protein yafX; Escherichia coli K-12 ortholog: b0248; Escherichia coli O157:H7 ortholog: z1656.
  
     0.691
c5155
Hypothetical protein yfjX; Escherichia coli K-12 ortholog: b2643; Escherichia coli O157:H7 ortholog: z1656.
  
     0.689
c3669
Hypothetical protein yfjX; Escherichia coli K-12 ortholog: b2643; Escherichia coli O157:H7 ortholog: z1656.
  
     0.687
c4571
Hypothetical protein yfjX; Escherichia coli K-12 ortholog: b2643; Escherichia coli O157:H7 ortholog: z1656.
  
     0.684
c1280
Hypothetical protein yafX; Escherichia coli K-12 ortholog: b0248; Escherichia coli O157:H7 ortholog: z1656.
  
     0.677
c0275
Hypothetical protein yafX; Escherichia coli K-12 ortholog: b0248; Escherichia coli O157:H7 ortholog: z1656.
  
     0.673
c3655
Antigen 43 precursor; AG43; Sap; Escherichia coli K-12 ortholog: b2000; Escherichia coli O157:H7 ortholog: z1651.
  
     0.662
c1273
Antigen 43 precursor; AG43; Sap; Escherichia coli K-12 ortholog: b2000; Escherichia coli O157:H7 ortholog: z1651.
  
     0.650
c0363
Putative RTX family exoprotein A gene; Residues 83 to 1160 of 1610 are 23.56 pct identical to residues 3030 to 4053 of 4106 from GenPept.129 : >emb|CAD18331.1| (AL646083) PUTATIVE HEMAGGLUTININ/HEMOLYSIN-RELATED PROTEIN [Ralstonia solanacearum].
  
     0.633
c1272
Hypothetical protein yeeP; Escherichia coli K-12 ortholog: b1999; Escherichia coli O157:H7 ortholog: z1650.
  
     0.621
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.