STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjeIHypothetical protein yjeI precursor; Escherichia coli K-12 ortholog: b4144; Escherichia coli O157:H7 ortholog: z5749. (128 aa)    
Predicted Functional Partners:
ydgH
Protein ydgH precursor; Escherichia coli K-12 ortholog: b1604; Escherichia coli O157:H7 ortholog: z2603.
  
     0.773
yecF
Hypothetical protein yecF; Escherichia coli K-12 ortholog: b1915; Escherichia coli O157:H7 ortholog: z3003.
  
     0.773
lomP
Putative Lom-like outer membrane protein of prophage; Escherichia coli O157:H7 ortholog: z6028.
  
     0.769
c3153
Putative outer membrane protein of prophage; Escherichia coli O157:H7 ortholog: z1917.
  
     0.768
ompX
Outer membrane protein X precursor; Escherichia coli K-12 ortholog: b0814; Escherichia coli O157:H7 ortholog: z1036.
  
     0.767
yejG
Hypothetical protein yejG; Escherichia coli K-12 ortholog: b2181; Escherichia coli O157:H7 ortholog: z3440.
  
     0.755
yiiQ
Hypothetical protein yiiQ precursor; Escherichia coli K-12 ortholog: b3920; Escherichia coli O157:H7 ortholog: z5465.
  
     0.753
holE
DNA polymerase III, theta subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity (By similarity).
  
     0.751
yqjE
Hypothetical protein yqjE; Escherichia coli K-12 ortholog: b3099; Escherichia coli O157:H7 ortholog: z4453.
  
     0.750
atpI
ATP synthase protein I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex; Belongs to the bacterial AtpI family.
  
     0.746
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.