STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c5302Hypothetical protein; Residues 1 to 268 of 280 are 97.76 pct identical to residues 1 to 268 of 294 from GenPept.129 : >gb|AAL50626.1|AF417476_3 (AF417476) unknown [Shigella flexneri]. (280 aa)    
Predicted Functional Partners:
c5299
Putative oxidoreductase; Residues 29 to 688 of 690 are 35.69 pct identical to residues 5 to 663 of 664 from GenPept.129 : >gb|AAD35512.1|AE001721_11 (AE001721) oxidoreductase, putative [Thermotoga maritima].
 
     0.844
c5303
Putative oxoacyl reductase; Residues 85 to 201 of 263 are 99.14 pct identical to residues 20 to 136 of 137 from GenPept.129 : >gb|AAL50625.1|AF417476_2 (AF417476) unknown [Shigella flexneri].
 
  
 0.829
c5300
Putative acetyl-CoA:acetoacetyl-CoA transferase; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.
       0.781
c5301
Hypothetical protein; Residues 4 to 255 of 258 are 36.75 pct identical to residues 3 to 254 of 256 from GenPept.129 : >gb|AAK65427.1| (AE007264) Putative dehydratase [Sinorhizobium meliloti]; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.773
c5304
Putative conserved protein; Residues 132 to 239 of 239 are 97.22 pct identical to residues 1 to 108 of 108 from MG1655 : b4205.
 
     0.694
c5298
Hexuronate transporter; Escherichia coli K-12 ortholog: b3093; Escherichia coli O157:H7 ortholog: z4446.
  
    0.547
ycjS
Hypothetical oxidoreductase ycjS; Escherichia coli K-12 ortholog: b1315; Escherichia coli O157:H7 ortholog: z2468.
  
  
 0.511
ydgJ
Hypothetical oxidoreductase ydgJ; Escherichia coli K-12 ortholog: b1624; Escherichia coli O157:H7 ortholog: z2629.
  
  
 0.511
ygjR
Hypothetical oxidoreductase ygjR; Escherichia coli K-12 ortholog: b3087; Escherichia coli O157:H7 ortholog: z4440.
  
  
 0.511
yhhX
Putative oxidoreductase yhhX; Escherichia coli K-12 ortholog: b3440; Escherichia coli O157:H7 ortholog: z4808.
  
  
 0.511
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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