STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c5357Putative conserved protein; Residues 4 to 229 of 229 are 37.44 pct identical to residues 167 to 393 of 393 from MG1655 : b4257. (229 aa)    
Predicted Functional Partners:
c5356
Hypothetical protein; Residues 1 to 144 of 176 are 64.58 pct identical to residues 1 to 144 of 395 from GenPept.129 : >gb|AAL23293.1| (AE008910) putative inner membrane protein [Salmonella typhimurium LT2].
      0.948
c5355
Hypothetical protein; Residues 7 to 173 of 173 are 91.61 pct identical to residues 1 to 167 of 167 from SwissProt.40 : >sp|P39337|YJGM_ECOLI HYPOTHETICAL 18.6 KDA PROTEIN IN ARGI-VALS INTERGENIC REGION.
       0.510
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.