STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chuAOuter membrane heme/hemoglobin receptor; Escherichia coli O157:H7 ortholog: z4911. (648 aa)    
Predicted Functional Partners:
chuS
Putative heme/hemoglobin transport protein; Escherichia coli O157:H7 ortholog: z4910.
 
  
 0.897
chuT
Putative Periplasmic binding protein; Escherichia coli O157:H7 ortholog: z4913.
 
  
 0.649
prrA
Putative outer membrane receptor, probably tonB dependent; Escherichia coli O157:H7 ortholog: z1961.
  
   
 0.628
yehQ
Hypothetical protein yehQ; Escherichia coli K-12 ortholog: b2122; Escherichia coli O157:H7 ortholog: z3295.
  
     0.600
c4309
Hypothetical protein.
       0.572
yjaA
Hypothetical protein yjaA; Escherichia coli K-12 ortholog: b4011.
      
 0.564
hmuV
Putative ATP-binding protein of ABC transport system; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
   
 0.556
chuU
Putative permease of iron compound ABC transport system; Escherichia coli O157:H7 ortholog: z4918; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.540
yfbJ
Hypothetical protein yfbJ; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family.
  
     0.507
entB
Isochorismatase; Escherichia coli K-12 ortholog: b0595; Escherichia coli O157:H7 ortholog: z0737.
  
  
 0.497
Your Current Organism:
Escherichia coli CFT073
NCBI taxonomy Id: 199310
Other names: E. coli CFT073, Escherichia coli str. CFT073, Escherichia coli strain CFT073
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