Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
bglF | fruA | BkAM31D_07920 | BkAM31D_03310 | PTS system beta-glucoside-specific EIIBCA component. | PTS system fructose-specific EIIABC component. | 0.987 |
bglF | lacC | BkAM31D_07920 | BkAM31D_03305 | PTS system beta-glucoside-specific EIIBCA component. | Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.699 |
bglF | mtlA | BkAM31D_07920 | BkAM31D_01160 | PTS system beta-glucoside-specific EIIBCA component. | PTS system mannitol-specific EIICBA component. | 0.608 |
bglF | mtlD | BkAM31D_07920 | BkAM31D_01180 | PTS system beta-glucoside-specific EIIBCA component. | Mannitol-1-phosphate 5-dehydrogenase. | 0.487 |
bglF | mtlF | BkAM31D_07920 | BkAM31D_01175 | PTS system beta-glucoside-specific EIIBCA component. | Transcriptional regulator MtlR; Frameshift. | 0.675 |
bglF | ptsG_2 | BkAM31D_07920 | BkAM31D_03355 | PTS system beta-glucoside-specific EIIBCA component. | PTS system glucose-specific EIICBA component. | 0.987 |
bglF | ptsH_2 | BkAM31D_07920 | BkAM31D_17805 | PTS system beta-glucoside-specific EIIBCA component. | Phosphocarrier protein HPr. | 0.978 |
bglF | ptsH_3 | BkAM31D_07920 | BkAM31D_18360 | PTS system beta-glucoside-specific EIIBCA component. | Phosphocarrier protein HPr. | 0.980 |
bglF | sacY | BkAM31D_07920 | BkAM31D_06170 | PTS system beta-glucoside-specific EIIBCA component. | Levansucrase and sucrase synthesis operon antiterminator. | 0.954 |
bglF | uxaB | BkAM31D_07920 | BkAM31D_06590 | PTS system beta-glucoside-specific EIIBCA component. | Altronate oxidoreductase. | 0.457 |
fruA | bglF | BkAM31D_03310 | BkAM31D_07920 | PTS system fructose-specific EIIABC component. | PTS system beta-glucoside-specific EIIBCA component. | 0.987 |
fruA | lacC | BkAM31D_03310 | BkAM31D_03305 | PTS system fructose-specific EIIABC component. | Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.999 |
fruA | mtlA | BkAM31D_03310 | BkAM31D_01160 | PTS system fructose-specific EIIABC component. | PTS system mannitol-specific EIICBA component. | 0.992 |
fruA | mtlD | BkAM31D_03310 | BkAM31D_01180 | PTS system fructose-specific EIIABC component. | Mannitol-1-phosphate 5-dehydrogenase. | 0.816 |
fruA | mtlF | BkAM31D_03310 | BkAM31D_01175 | PTS system fructose-specific EIIABC component. | Transcriptional regulator MtlR; Frameshift. | 0.996 |
fruA | ptsG_2 | BkAM31D_03310 | BkAM31D_03355 | PTS system fructose-specific EIIABC component. | PTS system glucose-specific EIICBA component. | 0.985 |
fruA | ptsH_2 | BkAM31D_03310 | BkAM31D_17805 | PTS system fructose-specific EIIABC component. | Phosphocarrier protein HPr. | 0.988 |
fruA | ptsH_3 | BkAM31D_03310 | BkAM31D_18360 | PTS system fructose-specific EIIABC component. | Phosphocarrier protein HPr. | 0.990 |
fruA | sacY | BkAM31D_03310 | BkAM31D_06170 | PTS system fructose-specific EIIABC component. | Levansucrase and sucrase synthesis operon antiterminator. | 0.824 |
fruA | uxaB | BkAM31D_03310 | BkAM31D_06590 | PTS system fructose-specific EIIABC component. | Altronate oxidoreductase. | 0.766 |
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