STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ltaS2_1D-xylose-proton symporter; Frameshift; Belongs to the LTA synthase family. (615 aa)    
Predicted Functional Partners:
ltaS2_2
Lipoteichoic acid synthase 2; Belongs to the LTA synthase family.
  
  
 
0.901
ARK31654.1
Hypothetical protein.
  
     0.593
ARK30409.1
Hypothetical protein; Belongs to the UPF0398 family.
  
     0.542
ARK28623.1
Hypothetical protein; Belongs to the SprT family.
  
    0.528
ARK29038.1
Hypothetical protein.
  
     0.496
ARK31459.1
Competence protein CoiA-like family protein.
  
     0.480
fgs_1
Folylpolyglutamate synthase.
       0.437
ARK30323.1
Tetratricopeptide repeat protein.
 
    0.437
comEB
ComE operon protein 2.
  
     0.415
ARK31749.1
Hypothetical protein.
  
     0.415
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
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