STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARK28796.1Hypothetical protein. (151 aa)    
Predicted Functional Partners:
ARK28795.1
Minor capsid protein from bacteriophage.
  
    0.906
ARK28794.1
Minor capsid protein.
  
    0.888
ARK28792.1
Hypothetical protein.
  
    0.858
ARK28798.1
Bacteriophage Gp15 protein.
  
    0.843
ARK28793.1
Minor capsid protein.
       0.806
ARK28791.1
Hypothetical protein.
       0.762
ARK28786.1
Phage portal protein, SPP1 Gp6-like.
  
    0.731
ARK28797.1
Hypothetical protein.
       0.686
ARK28790.1
Hypothetical protein.
       0.648
ARK28789.1
Hypothetical protein.
       0.601
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.