Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARK28878.1 | ARK28879.1 | BkAM31D_02860 | BkAM31D_02865 | ChrR Cupin-like domain protein. | Hypothetical protein. | 0.518 |
ARK28878.1 | pucR_2 | BkAM31D_02860 | BkAM31D_02870 | ChrR Cupin-like domain protein. | Purine catabolism regulatory protein. | 0.665 |
ARK28879.1 | ARK28878.1 | BkAM31D_02865 | BkAM31D_02860 | Hypothetical protein. | ChrR Cupin-like domain protein. | 0.518 |
ARK28879.1 | guaA | BkAM31D_02865 | BkAM31D_01845 | Hypothetical protein. | GMP synthase, glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | 0.525 |
ARK28879.1 | pucR_2 | BkAM31D_02865 | BkAM31D_02870 | Hypothetical protein. | Purine catabolism regulatory protein. | 0.609 |
ARK28879.1 | purC | BkAM31D_02865 | BkAM31D_01920 | Hypothetical protein. | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family. | 0.449 |
ARK28879.1 | purD | BkAM31D_02865 | BkAM31D_01960 | Hypothetical protein. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.457 |
ARK28879.1 | purE | BkAM31D_02865 | BkAM31D_01905 | Hypothetical protein. | N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.450 |
ARK28879.1 | purK | BkAM31D_02865 | BkAM31D_01910 | Hypothetical protein. | N5-carboxyaminoimidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). | 0.446 |
ARK28879.1 | purL | BkAM31D_02865 | BkAM31D_01935 | Hypothetical protein. | Phosphoribosylformylglycinamidine synthase 2; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...] | 0.469 |
ARK28879.1 | purM | BkAM31D_02865 | BkAM31D_01945 | Hypothetical protein. | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.423 |
ARK28879.1 | purQ | BkAM31D_02865 | BkAM31D_01930 | Hypothetical protein. | Phosphoribosylformylglycinamidine synthase 1; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...] | 0.432 |
guaA | ARK28879.1 | BkAM31D_01845 | BkAM31D_02865 | GMP synthase, glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | Hypothetical protein. | 0.525 |
guaA | purC | BkAM31D_01845 | BkAM31D_01920 | GMP synthase, glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family. | 0.777 |
guaA | purD | BkAM31D_01845 | BkAM31D_01960 | GMP synthase, glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | Phosphoribosylamine--glycine ligase; Belongs to the GARS family. | 0.914 |
guaA | purE | BkAM31D_01845 | BkAM31D_01905 | GMP synthase, glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.712 |
guaA | purK | BkAM31D_01845 | BkAM31D_01910 | GMP synthase, glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | N5-carboxyaminoimidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR). | 0.790 |
guaA | purL | BkAM31D_01845 | BkAM31D_01935 | GMP synthase, glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | Phosphoribosylformylglycinamidine synthase 2; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...] | 0.912 |
guaA | purM | BkAM31D_01845 | BkAM31D_01945 | GMP synthase, glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.736 |
guaA | purQ | BkAM31D_01845 | BkAM31D_01930 | GMP synthase, glutamine-hydrolyzing; Catalyzes the synthesis of GMP from XMP. | Phosphoribosylformylglycinamidine synthase 1; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...] | 0.784 |
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