STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ktrA_1Ktr system potassium uptake protein A. (221 aa)    
Predicted Functional Partners:
ktrB_1
Ktr system potassium uptake protein B.
 
 
 0.985
ktrB_2
Ktr system potassium uptake protein B.
 
 
 0.940
rsmB
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.653
moaE
Molybdopterin synthase catalytic subunit.
   
    0.526
nasF_1
NarK family nitrate/nitrite MFS transporter NarK2; Frameshift.
  
    0.442
nasF_2
Uroporphyrinogen-III C-methyltransferase.
  
    0.442
mrpA_1
Na(+)/H(+) antiporter subunit A.
     
 0.428
ARK28588.1
uroporphyrinogen-III synthase.
  
    0.425
hemD
Uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
  
    0.425
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.