Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARK28842.1 | ARK30653.1 | BkAM31D_02660 | BkAM31D_12895 | Putative metallo-hydrolase. | Sulfite exporter TauE/SafE. | 0.773 |
ARK28842.1 | ARK30655.1 | BkAM31D_02660 | BkAM31D_12905 | Putative metallo-hydrolase. | Hydroxyacylglutathione hydrolase. | 0.613 |
ARK28842.1 | ARK30656.1 | BkAM31D_02660 | BkAM31D_12910 | Putative metallo-hydrolase. | DsrE/DsrF-like family protein. | 0.453 |
ARK28842.1 | ARK30666.1 | BkAM31D_02660 | BkAM31D_12960 | Putative metallo-hydrolase. | Hypothetical protein. | 0.458 |
ARK28842.1 | tusA_3 | BkAM31D_02660 | BkAM31D_12900 | Putative metallo-hydrolase. | Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family. | 0.616 |
ARK28842.1 | tusA_4 | BkAM31D_02660 | BkAM31D_12920 | Putative metallo-hydrolase. | Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family. | 0.769 |
ARK28842.1 | tusA_5 | BkAM31D_02660 | BkAM31D_12940 | Putative metallo-hydrolase. | Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family. | 0.627 |
ARK29416.1 | ARK30653.1 | BkAM31D_05875 | BkAM31D_12895 | Hypothetical protein. | Sulfite exporter TauE/SafE. | 0.484 |
ARK30653.1 | ARK28842.1 | BkAM31D_12895 | BkAM31D_02660 | Sulfite exporter TauE/SafE. | Putative metallo-hydrolase. | 0.773 |
ARK30653.1 | ARK29416.1 | BkAM31D_12895 | BkAM31D_05875 | Sulfite exporter TauE/SafE. | Hypothetical protein. | 0.484 |
ARK30653.1 | ARK30655.1 | BkAM31D_12895 | BkAM31D_12905 | Sulfite exporter TauE/SafE. | Hydroxyacylglutathione hydrolase. | 0.853 |
ARK30653.1 | ARK30656.1 | BkAM31D_12895 | BkAM31D_12910 | Sulfite exporter TauE/SafE. | DsrE/DsrF-like family protein. | 0.509 |
ARK30653.1 | ARK30666.1 | BkAM31D_12895 | BkAM31D_12960 | Sulfite exporter TauE/SafE. | Hypothetical protein. | 0.480 |
ARK30653.1 | baeB | BkAM31D_12895 | BkAM31D_12980 | Sulfite exporter TauE/SafE. | Putative polyketide biosynthesis zinc-dependent hydrolase BaeB. | 0.682 |
ARK30653.1 | tehB | BkAM31D_12895 | BkAM31D_12890 | Sulfite exporter TauE/SafE. | Putative S-adenosyl-L-methionine-dependent methyltransferase TehB. | 0.478 |
ARK30653.1 | tusA_3 | BkAM31D_12895 | BkAM31D_12900 | Sulfite exporter TauE/SafE. | Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family. | 0.573 |
ARK30653.1 | tusA_4 | BkAM31D_12895 | BkAM31D_12920 | Sulfite exporter TauE/SafE. | Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family. | 0.590 |
ARK30653.1 | tusA_5 | BkAM31D_12895 | BkAM31D_12940 | Sulfite exporter TauE/SafE. | Sulfurtransferase TusA; Belongs to the sulfur carrier protein TusA family. | 0.479 |
ARK30655.1 | ARK28842.1 | BkAM31D_12905 | BkAM31D_02660 | Hydroxyacylglutathione hydrolase. | Putative metallo-hydrolase. | 0.613 |
ARK30655.1 | ARK30653.1 | BkAM31D_12905 | BkAM31D_12895 | Hydroxyacylglutathione hydrolase. | Sulfite exporter TauE/SafE. | 0.853 |
page 1 of 4