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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARK31480.1Hypothetical protein. (273 aa)    
Predicted Functional Partners:
ARK31478.1
Hypothetical protein.
 
     0.802
ARK30684.1
Hypothetical protein.
 
     0.775
ARK29566.1
GTP-binding protein YsxC.
  
    0.700
ARK29561.1
Hypothetical protein.
  
     0.659
ARK29393.1
Hypothetical protein.
  
     0.656
ARK31479.1
Hypothetical protein.
       0.651
ARK31770.1
Hypothetical protein.
  
     0.634
carD
RNA polymerase-binding transcription factor CarD; Frameshift.
  
     0.625
ARK31127.1
Hypothetical protein.
  
     0.621
ARK31151.1
Hypothetical protein.
  
     0.618
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.