Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARK32339.1 | ARK32340.1 | BkAM31D_22155 | BkAM31D_22160 | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | 0.936 |
ARK32339.1 | ARK32342.1 | BkAM31D_22155 | BkAM31D_22170 | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | Hypothetical protein. | 0.494 |
ARK32339.1 | alsT_3 | BkAM31D_22155 | BkAM31D_22150 | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | Amino-acid carrier protein AlsT; Frameshift. | 0.734 |
ARK32339.1 | amaA_2 | BkAM31D_22155 | BkAM31D_22165 | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | N-acyl-L-amino acid amidohydrolase. | 0.433 |
ARK32340.1 | ARK32339.1 | BkAM31D_22160 | BkAM31D_22155 | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | 0.936 |
ARK32340.1 | ARK32342.1 | BkAM31D_22160 | BkAM31D_22170 | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | Hypothetical protein. | 0.542 |
ARK32340.1 | alsT_3 | BkAM31D_22160 | BkAM31D_22150 | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | Amino-acid carrier protein AlsT; Frameshift. | 0.790 |
ARK32340.1 | amaA_2 | BkAM31D_22160 | BkAM31D_22165 | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | N-acyl-L-amino acid amidohydrolase. | 0.461 |
ARK32342.1 | ARK32339.1 | BkAM31D_22170 | BkAM31D_22155 | Hypothetical protein. | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | 0.494 |
ARK32342.1 | ARK32340.1 | BkAM31D_22170 | BkAM31D_22160 | Hypothetical protein. | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | 0.542 |
ARK32342.1 | abgT | BkAM31D_22170 | BkAM31D_21620 | Hypothetical protein. | P-aminobenzoyl-glutamate transport protein. | 0.417 |
ARK32342.1 | alsT_3 | BkAM31D_22170 | BkAM31D_22150 | Hypothetical protein. | Amino-acid carrier protein AlsT; Frameshift. | 0.417 |
ARK32342.1 | amaA_2 | BkAM31D_22170 | BkAM31D_22165 | Hypothetical protein. | N-acyl-L-amino acid amidohydrolase. | 0.723 |
ARK32342.1 | nhaC | BkAM31D_22170 | BkAM31D_21795 | Hypothetical protein. | Na(+)/H(+) antiporter NhaC. | 0.573 |
abgT | ARK32342.1 | BkAM31D_21620 | BkAM31D_22170 | P-aminobenzoyl-glutamate transport protein. | Hypothetical protein. | 0.417 |
abgT | amaA_2 | BkAM31D_21620 | BkAM31D_22165 | P-aminobenzoyl-glutamate transport protein. | N-acyl-L-amino acid amidohydrolase. | 0.407 |
alsT_3 | ARK32339.1 | BkAM31D_22150 | BkAM31D_22155 | Amino-acid carrier protein AlsT; Frameshift. | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | 0.734 |
alsT_3 | ARK32340.1 | BkAM31D_22150 | BkAM31D_22160 | Amino-acid carrier protein AlsT; Frameshift. | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | 0.790 |
alsT_3 | ARK32342.1 | BkAM31D_22150 | BkAM31D_22170 | Amino-acid carrier protein AlsT; Frameshift. | Hypothetical protein. | 0.417 |
amaA_2 | ARK32339.1 | BkAM31D_22165 | BkAM31D_22155 | N-acyl-L-amino acid amidohydrolase. | N(G),N(G)-dimethylarginine dimethylaminohydrolase. | 0.433 |
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