STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opuACGlycine betaine-binding protein OpuAC precursor. (297 aa)    
Predicted Functional Partners:
opuAB
Glycine betaine transport system permease protein OpuAB.
 
 0.999
opuAA
Glycine betaine transport ATP-binding protein OpuAA.
 
 0.999
opcR
HTH-type transcriptional repressor OpcR; Belongs to the GbsR family.
 
   
 0.698
glnP
Glutamine transport system permease protein GlnP.
     
 0.592
potA
Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
    
 0.500
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
    0.457
ARK32394.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
     
 0.455
comP
Sensor histidine kinase ComP; Frameshift.
       0.443
purM
Phosphoribosylformylglycinamidine cyclo-ligase.
   
    0.416
artQ
Arginine transport system permease protein ArtQ.
     
 0.405
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.