STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actPCation/acetate symporter ActP; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (553 aa)    
Predicted Functional Partners:
guaB_2
Inosine-5'-monophosphate dehydrogenase.
 
  
 0.966
ARK32733.1
Hypothetical protein.
 
    0.945
ARK32821.1
Putative nucleotidyltransferase substrate binding domain protein.
 
  
 0.831
polC_3
DNA polymerase III PolC-type.
 
     0.739
acsA_1
Acetyl-coenzyme A synthetase.
 
  
 0.667
bclA
Benzoate--CoA ligase.
  
  
 0.601
acsA_2
Acetyl-coenzyme A synthetase.
  
  
 0.601
acsA_3
Acetyl-coenzyme A synthetase.
  
  
 0.601
ARK32735.1
Hypothetical protein.
       0.562
citZ
Citrate synthase 2; Belongs to the citrate synthase family.
  
  
 0.506
Your Current Organism:
Bacillus krulwichiae
NCBI taxonomy Id: 199441
Other names: B. krulwichiae, Bacillus krulwichiae Yumoto et al. 2003, Bacillus krulwichii, IAM 15000, JCM 11691, NBRC 102362, NCIMB 13904, strain AM31D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.