STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570385_00116Unannotated protein. (231 aa)    
Predicted Functional Partners:
GCA_001570385_00115
Unannotated protein.
 
   
 0.948
GCA_001570385_01328
Unannotated protein.
  
     0.583
GCA_001570385_00117
Unannotated protein.
       0.578
GCA_001570385_00866
Unannotated protein.
  
     0.578
GCA_001570385_04216
Unannotated protein.
  
     0.576
GCA_001570385_01058
Unannotated protein.
  
     0.563
GCA_001570385_02587
Unannotated protein.
  
     0.550
GCA_001570385_00871
Unannotated protein.
  
     0.534
GCA_001570385_07611
Unannotated protein.
  
     0.519
GCA_001570385_00120
Unannotated protein.
 
     0.518
Your Current Organism:
Microtetraspora glauca
NCBI taxonomy Id: 1996
Other names: ATCC 23057, DSM 43311, IFO 14761, JCM 3300, M. glauca, NBRC 14761, NRRL B-3735, VKM Ac-663
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.