STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570385_01114Unannotated protein. (335 aa)    
Predicted Functional Partners:
GCA_001570385_04311
Unannotated protein.
  
  
 0.787
GCA_001570385_03530
Unannotated protein.
  
 
 0.726
GCA_001570385_04394
Unannotated protein.
 
 
 0.724
GCA_001570385_01113
Unannotated protein.
     
 0.668
GCA_001570385_01115
Unannotated protein.
       0.668
GCA_001570385_00010
Unannotated protein.
  
 
 0.644
GCA_001570385_04327
Unannotated protein.
 
  
 0.625
GCA_001570385_02704
Unannotated protein.
 
 
 0.613
GCA_001570385_04628
Unannotated protein.
 
  
 0.604
GCA_001570385_07565
Unannotated protein.
 
  
 0.599
Your Current Organism:
Microtetraspora glauca
NCBI taxonomy Id: 1996
Other names: ATCC 23057, DSM 43311, IFO 14761, JCM 3300, M. glauca, NBRC 14761, NRRL B-3735, VKM Ac-663
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.