STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570385_01188Unannotated protein. (312 aa)    
Predicted Functional Partners:
GCA_001570385_01235
Unannotated protein.
  
     0.721
GCA_001570385_06863
Unannotated protein.
  
     0.717
GCA_001570385_05338
Unannotated protein.
  
     0.676
GCA_001570385_07611
Unannotated protein.
  
     0.674
GCA_001570385_02851
Unannotated protein.
  
     0.672
GCA_001570385_01012
Unannotated protein.
  
 
   0.670
GCA_001570385_02186
Unannotated protein.
  
     0.654
GCA_001570385_05335
Unannotated protein.
  
     0.649
GCA_001570385_01187
Unannotated protein.
     
 0.639
GCA_001570385_01243
Unannotated protein.
  
     0.629
Your Current Organism:
Microtetraspora glauca
NCBI taxonomy Id: 1996
Other names: ATCC 23057, DSM 43311, IFO 14761, JCM 3300, M. glauca, NBRC 14761, NRRL B-3735, VKM Ac-663
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.