STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570385_01711Unannotated protein. (244 aa)    
Predicted Functional Partners:
GCA_001570385_01710
Unannotated protein.
 
 0.990
GCA_001570385_03775
Unannotated protein.
 
    
0.898
GCA_001570385_07265
Unannotated protein.
 
   
  0.732
GCA_001570385_05051
Unannotated protein.
 
    
0.722
GCA_001570385_02465
Unannotated protein.
 
 0.719
GCA_001570385_04229
Unannotated protein.
 
 
 0.704
GCA_001570385_03701
Unannotated protein.
 
 
  0.668
GCA_001570385_04922
Unannotated protein.
 
  0.657
GCA_001570385_05614
Unannotated protein.
  
 
 0.655
GCA_001570385_05444
Unannotated protein.
 
  0.653
Your Current Organism:
Microtetraspora glauca
NCBI taxonomy Id: 1996
Other names: ATCC 23057, DSM 43311, IFO 14761, JCM 3300, M. glauca, NBRC 14761, NRRL B-3735, VKM Ac-663
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.