STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570385_02152Unannotated protein. (273 aa)    
Predicted Functional Partners:
GCA_001570385_02153
Unannotated protein.
       0.778
GCA_001570385_07888
Unannotated protein.
     
 0.672
GCA_001570385_06443
Unannotated protein.
  
 0.647
GCA_001570385_02154
Unannotated protein.
       0.553
GCA_001570385_05646
Unannotated protein.
  
  
  0.531
GCA_001570385_01542
Unannotated protein.
 
     0.493
GCA_001570385_00518
Unannotated protein.
   
 0.483
GCA_001570385_04611
Unannotated protein.
   
 
 0.478
GCA_001570385_01009
Unannotated protein.
   
 
 0.472
GCA_001570385_08360
Unannotated protein.
  
     0.469
Your Current Organism:
Microtetraspora glauca
NCBI taxonomy Id: 1996
Other names: ATCC 23057, DSM 43311, IFO 14761, JCM 3300, M. glauca, NBRC 14761, NRRL B-3735, VKM Ac-663
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.