STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570385_02596Unannotated protein. (243 aa)    
Predicted Functional Partners:
GCA_001570385_08070
Unannotated protein.
  
 0.989
GCA_001570385_03564
Unannotated protein.
 0.980
GCA_001570385_03956
Unannotated protein.
 0.980
GCA_001570385_02594
Unannotated protein.
 0.934
GCA_001570385_01484
Unannotated protein.
    
   0.917
GCA_001570385_03693
Unannotated protein.
 
 0.888
GCA_001570385_03394
Unannotated protein.
 
 0.887
GCA_001570385_04410
Unannotated protein.
 
 0.887
GCA_001570385_03563
Unannotated protein.
 0.886
GCA_001570385_04800
Unannotated protein.
 
 0.885
Your Current Organism:
Microtetraspora glauca
NCBI taxonomy Id: 1996
Other names: ATCC 23057, DSM 43311, IFO 14761, JCM 3300, M. glauca, NBRC 14761, NRRL B-3735, VKM Ac-663
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.