STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001570385_03513Unannotated protein. (246 aa)    
Predicted Functional Partners:
GCA_001570385_03514
Unannotated protein.
       0.743
GCA_001570385_03511
Unannotated protein.
       0.684
GCA_001570385_03516
Unannotated protein.
       0.676
GCA_001570385_03512
Unannotated protein.
       0.670
GCA_001570385_03515
Unannotated protein.
       0.669
GCA_001570385_03517
Unannotated protein.
     
 0.494
GCA_001570385_03518
Unannotated protein.
     
 0.485
GCA_001570385_03519
Unannotated protein.
       0.474
GCA_001570385_03510
Unannotated protein.
       0.458
Your Current Organism:
Microtetraspora glauca
NCBI taxonomy Id: 1996
Other names: ATCC 23057, DSM 43311, IFO 14761, JCM 3300, M. glauca, NBRC 14761, NRRL B-3735, VKM Ac-663
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.